Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011632.1 Corchorus capsularis cultivar CVL-1 contig11653, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36325

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--74
2
37.0
2
100
0
148
0
50
0
50
1.00
400--459
30
2.0
30
93
0
102
31
11
36
20
1.88
554--622
33
2.1
33
97
0
129
47
20
8
23
1.77
805--829
13
1.9
13
100
0
50
56
28
0
16
1.41
1457--1500
22
2.0
22
95
0
79
9
20
13
56
1.64
1626--1652
13
2.1
13
100
0
54
14
22
7
55
1.64
4530--5113
35
16.7
35
83
8
687
38
11
18
31
1.86
4636--5078
73
6.3
66
86
8
302
39
11
18
31
1.85
7002--7060
31
1.9
31
85
0
82
32
18
5
44
1.72
14712--14760
16
3.0
16
84
3
62
24
4
22
48
1.67
14732--14773
14
3.1
14
79
3
50
26
4
19
50
1.67
16174--16230
29
1.9
30
89
3
89
31
8
17
42
1.80
21814--21861
20
2.4
20
100
0
96
25
37
29
8
1.85
27932--28026
30
3.2
30
98
0
181
27
40
26
6
1.80
32482--32528
20
2.3
20
100
0
94
51
19
10
19
1.75

Tables:   1

The End!