Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011641.1 Corchorus capsularis cultivar CVL-1 contig11662, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12776

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2321--2410
26
3.5
26
90
3
128
5
35
41
17
1.73
2321--2422
26
3.9
26
90
2
116
4
34
41
19
1.73
3392--3467
26
3.1
23
83
12
82
2
39
42
15
1.61
3347--3455
26
4.1
26
84
5
137
4
35
42
17
1.70
7404--7440
18
2.1
18
94
0
65
24
21
2
51
1.61
7869--7902
18
1.9
17
94
5
59
50
23
5
20
1.70
7874--7930
27
2.1
27
80
6
62
49
26
7
17
1.72
12656--12683
12
2.3
12
100
0
56
25
0
7
67
1.15
12650--12703
21
2.8
21
78
16
71
29
0
11
59
1.32
12688--12716
11
2.7
11
94
5
51
31
0
13
55
1.39

Tables:   1

The End!