Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011647.1 Corchorus capsularis cultivar CVL-1 contig11668, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33965

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9454--9484
2
15.0
2
93
6
53
48
3
0
48
1.17
21121--21147
12
2.2
12
100
0
54
18
14
7
59
1.58
22657--22705
11
4.3
12
82
10
59
75
2
4
18
1.06
22657--22705
17
2.9
17
81
0
62
75
2
4
18
1.06
26635--26667
16
1.9
18
88
11
52
3
24
0
72
0.98
27068--27092
11
2.3
11
100
0
50
36
0
8
56
1.29
27323--27356
15
2.3
15
90
5
52
26
20
8
44
1.81
28188--28234
25
1.9
25
87
12
71
38
0
2
59
1.09
31916--32094
31
5.9
31
82
2
175
30
24
27
17
1.97
33807--33874
26
2.6
26
90
0
109
54
10
1
33
1.43
33807--33924
52
2.4
51
79
13
122
54
10
1
33
1.44

Tables:   1

The End!