Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001165.1 Corchorus capsularis cultivar CVL-1 contig01165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2517

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222--273
22
2.4
22
90
3
88
36
11
7
44
1.70
220--343
22
5.6
22
73
3
79
33
14
8
42
1.77
198--365
44
3.8
43
73
7
126
35
13
8
42
1.76
464--555
22
4.2
22
78
10
98
38
19
7
34
1.80
465--551
44
2.0
44
86
8
124
35
20
8
35
1.82
620--729
22
5.0
21
73
9
85
37
17
10
35
1.83
895--932
19
2.0
20
85
15
53
63
2
5
28
1.30
1175--1213
14
3.0
13
82
10
53
53
0
0
46
1.00
947--1249
168
1.8
165
85
7
425
44
7
10
37
1.68
1255--1334
38
2.1
38
88
2
117
58
12
15
13
1.63
1449--1516
31
2.2
31
89
7
102
50
4
14
30
1.63

Tables:   1

The End!