Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011653.1 Corchorus capsularis cultivar CVL-1 contig11674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28039

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2943--2975
17
2.0
16
94
5
57
54
0
0
45
0.99
5976--6008
2
16.5
2
93
0
57
48
3
0
48
1.17
6403--6460
29
1.9
31
86
6
84
32
22
10
34
1.88
12385--12427
20
2.2
20
100
0
86
32
16
27
23
1.96
17271--17324
29
1.9
28
85
7
74
18
9
14
57
1.64
18322--18382
30
2.1
30
87
3
88
55
1
13
29
1.47
19018--19085
32
2.1
33
91
2
111
23
8
25
42
1.82
19429--19475
21
2.2
21
84
0
58
23
31
38
6
1.80
19440--19519
21
3.8
21
85
3
99
16
31
45
7
1.75
25576--25611
19
1.9
18
88
5
54
41
2
25
30
1.69
26886--26927
21
2.0
21
86
13
59
21
2
9
66
1.32

Tables:   1

The End!