Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011654.1 Corchorus capsularis cultivar CVL-1 contig11675, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33851

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2259--2288
6
5.0
6
100
0
60
33
0
0
66
0.92
3852--3901
21
2.4
21
75
0
55
32
42
20
6
1.76
14174--14205
11
2.9
11
90
0
55
37
0
18
43
1.51
14174--14233
22
2.9
22
76
19
65
41
3
18
36
1.67
14184--14221
19
2.1
18
90
5
58
44
2
21
31
1.66
15567--15603
6
6.3
6
96
3
67
35
0
13
51
1.41
15917--15962
21
2.2
21
96
0
83
60
6
13
19
1.54
17023--17063
15
2.7
15
96
0
73
43
21
26
7
1.79
18732--18761
12
2.5
12
94
0
51
43
10
20
26
1.83
18786--18810
9
2.8
9
100
0
50
40
0
12
48
1.40
19932--19972
8
4.8
8
83
16
55
41
0
24
34
1.55
19937--19982
19
2.5
19
92
3
76
43
2
21
32
1.65
21326--21362
6
6.3
6
96
3
67
35
0
13
51
1.41
27130--27154
10
2.5
10
100
0
50
24
8
20
48
1.76

Tables:   1

The End!