Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011656.1 Corchorus capsularis cultivar CVL-1 contig11677, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41118

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
961--1000
12
3.3
12
96
0
71
0
20
40
40
1.52
9958--10019
30
2.1
30
96
0
115
22
9
25
41
1.84
19076--19115
12
3.3
12
82
10
55
85
15
0
0
0.61
19075--19115
16
2.9
14
82
17
50
85
14
0
0
0.60
38080--38109
6
5.0
6
100
0
60
50
0
33
16
1.46

Tables:   1

The End!