Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011658.1 Corchorus capsularis cultivar CVL-1 contig11679, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22489

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3589--3657
25
2.5
27
71
19
63
50
1
2
44
1.25
9107--9149
10
4.2
10
85
5
50
88
6
2
2
0.68
9108--9136
1
29.0
1
100
0
58
100
0
0
0
0.00
11525--11590
25
2.8
24
75
6
71
45
10
10
33
1.73
15074--15123
21
2.4
21
93
3
84
30
18
26
26
1.98
15140--15196
30
1.9
30
85
0
78
31
21
14
33
1.92
18731--18868
72
1.9
72
86
0
195
24
26
15
34
1.95
19876--19923
21
2.3
21
88
0
69
29
18
25
27
1.98
20144--20179
2
18.0
2
100
0
72
50
0
0
50
1.00
21815--21849
3
11.7
3
100
0
70
34
0
0
65
0.93
22398--22428
2
15.5
2
100
0
62
51
0
0
48
1.00
22428--22482
2
27.5
2
100
0
110
50
0
49
0
1.00

Tables:   1

The End!