Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011660.1 Corchorus capsularis cultivar CVL-1 contig11681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21251

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
382--477
38
2.6
37
79
12
115
14
17
9
58
1.62
616--653
19
2.0
20
85
15
53
28
5
2
63
1.30
819--1001
22
8.2
21
74
11
125
33
8
19
38
1.82
816--947
66
2.0
66
79
8
144
34
10
18
36
1.86
820--1001
44
4.1
44
80
8
156
33
8
19
39
1.81
1037--1344
22
13.8
22
67
13
119
37
10
16
35
1.83
1359--1404
22
2.2
21
92
7
76
41
4
8
45
1.55
1444--1981
22
25.0
21
68
15
219
37
9
17
35
1.83
1512--1563
20
2.6
20
96
0
95
44
13
15
26
1.84
1676--1782
23
4.7
23
84
2
119
40
9
14
36
1.78
12866--12890
2
12.5
2
100
0
50
52
0
0
48
1.00
13014--13097
31
2.7
31
78
14
84
30
9
19
40
1.83

Tables:   1

The End!