Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011662.1 Corchorus capsularis cultivar CVL-1 contig11683, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13881

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4191--4220
13
2.2
14
94
5
53
46
0
6
46
1.29
12747--12827
27
3.0
27
76
7
76
16
23
1
59
1.44
12892--12980
21
4.3
20
78
7
88
20
20
7
51
1.71
12975--13242
22
12.0
22
73
16
185
18
20
6
54
1.64
13035--13091
15
3.9
15
68
13
55
15
24
5
54
1.62
13070--13230
21
7.5
21
73
12
123
18
18
6
56
1.63
13069--13222
43
3.6
41
83
8
166
17
18
6
57
1.61
13237--13364
55
2.3
55
95
0
229
26
17
7
48
1.73

Tables:   1

The End!