Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011676.1 Corchorus capsularis cultivar CVL-1 contig11697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5026

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--98
2
49.5
2
97
2
189
0
50
0
50
1.00
968--1001
14
2.4
14
80
0
50
29
2
0
67
1.05
1369--1444
20
3.7
20
79
15
66
36
13
5
44
1.66
1369--1511
22
6.6
21
75
13
96
37
14
6
40
1.73
1529--1671
22
6.5
22
83
1
115
35
12
9
41
1.76
1573--1671
22
4.5
22
85
2
126
35
10
10
44
1.72
1573--1671
45
2.2
44
85
1
126
35
10
10
44
1.72
1675--1731
22
2.6
22
83
5
62
35
15
8
40
1.79
1684--1733
22
2.3
22
85
0
64
32
18
8
42
1.79
1791--2227
22
19.9
22
74
8
354
36
18
9
35
1.84
1810--2451
44
14.9
44
73
9
414
35
17
10
36
1.85
1837--2451
66
9.6
66
74
9
326
35
17
10
36
1.84
2242--2451
22
9.8
22
73
5
124
32
15
11
39
1.84
2696--2737
21
2.0
22
95
4
77
42
0
14
42
1.45
2961--2988
8
3.5
8
100
0
56
35
10
14
39
1.81

Tables:   1

The End!