Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011678.1 Corchorus capsularis cultivar CVL-1 contig11699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15822

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--559
56
3.0
56
93
1
273
30
10
15
43
1.79
746--770
12
2.1
12
100
0
50
40
8
28
24
1.83
13653--13727
21
3.5
21
78
8
64
21
24
8
46
1.77
13732--13772
21
2.0
21
85
4
57
24
14
4
56
1.58
14092--14336
51
4.8
52
83
6
274
37
16
4
41
1.69
14130--14336
51
4.1
51
85
1
276
38
16
3
41
1.67

Tables:   1

The End!