Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011679.1 Corchorus capsularis cultivar CVL-1 contig11700, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21866

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3203--3231
6
4.8
6
100
0
58
48
17
0
34
1.47
5784--5813
12
2.5
12
100
0
60
53
6
6
33
1.53
9321--9364
6
7.5
6
97
2
81
54
13
0
31
1.39
13642--14027
156
2.5
156
77
9
396
32
14
18
34
1.92
14367--14405
17
2.3
17
95
0
69
28
35
5
30
1.79
14552--14592
21
2.0
21
100
0
82
31
34
14
19
1.92
15302--15327
2
13.0
2
100
0
52
50
0
0
50
1.00
18885--18919
16
2.2
16
89
0
52
22
2
5
68
1.24

Tables:   1

The End!