Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011681.1 Corchorus capsularis cultivar CVL-1 contig11702, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23734

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
665--689
5
5.0
5
100
0
50
80
0
0
20
0.72
2078--2186
33
3.3
33
76
5
139
25
12
20
41
1.88
2069--2211
66
2.2
66
93
0
241
27
11
19
41
1.86
2224--2309
33
2.6
33
81
0
100
32
11
16
39
1.84
4239--4345
33
3.2
33
84
2
117
23
39
27
10
1.87
7839--7872
14
2.4
15
90
9
54
82
2
11
2
0.89
12076--12103
13
2.2
13
100
0
56
85
0
0
14
0.59
22959--22990
6
5.5
6
92
7
57
34
15
0
50
1.45
23078--23320
70
3.2
70
74
19
236
34
13
2
48
1.55

Tables:   1

The End!