Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011689.1 Corchorus capsularis cultivar CVL-1 contig11710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28473

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1064--1107
6
7.5
6
94
5
81
50
0
15
34
1.45
1064--1119
18
3.2
17
87
12
62
50
0
17
32
1.47
1958--1987
2
15.0
2
100
0
60
50
0
0
50
1.00
7358--7417
32
1.9
31
83
10
77
35
31
10
23
1.88
13933--14118
99
1.9
100
88
1
284
41
14
19
23
1.89
16380--16458
35
2.3
35
84
6
108
22
18
8
49
1.75
19557--19590
6
5.5
6
96
3
59
29
0
14
55
1.40
21307--21344
18
2.1
19
85
5
51
15
28
13
42
1.85
23083--23189
33
3.2
32
86
5
142
9
28
39
22
1.85
23169--23210
21
2.0
21
95
0
75
11
33
30
23
1.91

Tables:   1

The End!