Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011693.1 Corchorus capsularis cultivar CVL-1 contig11714, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11118

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2816--2856
20
2.0
20
90
0
64
39
21
9
29
1.86
3330--3401
27
2.7
27
88
0
99
47
26
12
13
1.79
3858--4193
70
4.9
68
88
3
451
27
16
27
27
1.97
3858--4193
139
2.4
137
87
5
480
27
16
27
27
1.97
6122--6179
29
2.0
29
87
12
84
3
24
0
72
1.00
6137--6176
17
2.3
18
87
12
57
2
25
0
72
0.97
6833--6881
14
3.6
13
79
17
55
38
14
8
38
1.76
7688--7758
34
2.1
34
100
0
142
11
22
19
46
1.81
9575--9768
27
7.2
26
76
9
167
21
21
3
54
1.59
9575--9768
55
3.6
52
77
12
180
21
21
3
54
1.59
9771--10090
166
1.9
165
86
6
459
22
18
5
54
1.64
9970--10045
22
3.5
22
74
1
73
23
17
3
55
1.58
10067--10340
20
13.0
20
73
17
136
21
21
4
52
1.64
10067--10350
127
2.2
127
92
5
468
21
21
4
52
1.65

Tables:   1

The End!