Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011695.1 Corchorus capsularis cultivar CVL-1 contig11716, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13810

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--618
2
18.0
2
100
0
72
50
0
0
50
1.00
1193--1237
23
2.0
23
86
0
63
48
6
8
35
1.61
1242--1298
22
2.5
22
88
2
78
45
7
7
40
1.58
1736--1760
13
1.9
13
100
0
50
44
0
0
56
0.99
1973--2029
30
1.9
30
88
0
87
28
1
33
36
1.68
2204--2253
16
3.1
16
71
5
55
12
8
12
68
1.40

Tables:   1

The End!