Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011706.1 Corchorus capsularis cultivar CVL-1 contig11727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31581

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
428--459
16
1.9
17
93
6
57
78
6
0
15
0.95
2219--2255
18
2.1
18
94
0
65
27
24
0
48
1.51
2222--2262
18
2.3
18
86
0
55
26
26
2
43
1.67
2723--3014
145
2.0
146
95
2
507
41
14
18
25
1.88
6436--6761
162
2.0
162
98
0
634
38
13
12
35
1.83
15489--15549
32
1.9
32
96
0
113
6
13
36
44
1.69
15537--15613
6
12.5
6
71
15
50
3
18
44
33
1.68
15525--15575
22
2.3
22
93
0
84
1
15
43
39
1.58
15493--15549
16
3.6
16
92
0
96
5
12
38
43
1.65
16368--16428
16
3.9
15
87
6
77
4
14
40
39
1.68
16357--16442
32
2.7
32
73
8
84
3
17
46
32
1.65

Tables:   1

The End!