Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011710.1 Corchorus capsularis cultivar CVL-1 contig11731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6364

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1558--1592
16
2.2
16
94
0
61
45
14
28
11
1.79
1637--1860
91
2.5
91
91
1
360
35
13
19
31
1.90
2045--2125
40
2.0
40
85
7
110
40
22
11
25
1.87
1945--2133
104
1.9
101
83
7
249
39
23
11
24
1.88
3112--3158
2
23.0
2
89
4
67
44
4
0
51
1.21
3285--3539
110
2.3
109
88
5
379
38
10
3
47
1.55
6285--6347
29
2.2
29
94
0
108
30
6
28
34
1.82

Tables:   1

The End!