Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011711.1 Corchorus capsularis cultivar CVL-1 contig11732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13214

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1440--1471
3
11.0
3
93
6
57
0
0
34
65
0.93
1617--1669
25
2.1
25
82
0
61
45
3
5
45
1.45
3910--4197
84
3.4
83
85
7
368
21
12
26
38
1.89
3953--4197
41
5.8
42
81
8
248
22
12
27
37
1.90
5616--5720
55
1.9
55
92
3
176
24
16
13
45
1.83
11669--11861
35
5.5
35
88
0
269
35
16
19
27
1.94
11640--12390
70
10.7
70
87
4
333
31
21
17
29
1.96
11640--12393
105
7.1
104
88
3
752
31
21
17
29
1.96
11845--12393
35
15.6
35
93
0
855
30
22
17
29
1.96

Tables:   1

The End!