Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011713.1 Corchorus capsularis cultivar CVL-1 contig11734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20836

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3522--3550
15
1.9
15
100
0
58
13
13
27
44
1.82
5846--5891
23
2.0
23
95
0
83
28
0
21
50
1.49
10845--10944
22
4.5
22
78
9
96
39
15
11
35
1.82
10821--10944
44
2.8
43
84
4
149
41
14
10
33
1.80
10911--10963
22
2.4
22
87
0
70
49
16
7
26
1.73
11034--11110
22
3.5
22
80
5
84
37
6
19
36
1.78
11171--11268
22
4.5
22
70
19
64
34
9
12
43
1.74
11279--11333
22
2.5
21
77
8
56
32
12
14
40
1.84
11453--11534
22
3.7
22
79
12
105
36
13
10
39
1.80
11433--11554
44
2.8
44
84
0
154
40
13
11
34
1.81
11453--11554
22
4.7
21
78
11
98
36
13
11
38
1.82
11649--11993
22
15.6
22
66
13
73
35
10
16
37
1.84
10744--11975
615
2.0
612
95
0
2203
38
12
15
33
1.85
11872--12016
66
2.2
66
79
0
155
35
13
14
35
1.86
11760--12016
22
11.8
22
69
9
123
34
11
15
37
1.84
11872--12016
44
3.3
43
79
3
148
35
13
14
35
1.86
13498--13536
19
2.1
19
100
0
78
35
0
0
64
0.94

Tables:   1

The End!