Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011714.1 Corchorus capsularis cultivar CVL-1 contig11735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32771

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9326--9379
6
9.0
6
100
0
108
16
50
0
33
1.46
14099--14145
13
3.5
13
72
16
51
12
25
0
61
1.31
14206--14627
22
20.2
21
71
17
197
21
19
5
53
1.65
14218--14544
22
15.9
21
77
13
315
22
19
5
52
1.66
14206--14544
122
2.8
121
93
2
572
22
19
5
52
1.67
14433--14496
15
4.3
15
69
25
55
23
15
3
57
1.52
14556--14611
15
3.8
15
75
11
62
19
16
5
58
1.56
14602--14727
35
3.6
35
85
3
155
18
23
3
54
1.57
14673--14770
50
2.0
50
85
4
135
20
21
3
55
1.57
14868--15015
38
3.8
38
88
4
199
28
15
5
50
1.66
14953--15015
22
3.1
22
63
25
57
30
14
4
50
1.63
18352--18417
27
2.5
26
83
11
82
45
21
13
19
1.85
29719--29779
30
2.1
29
82
14
72
24
19
11
44
1.84
32741--32771
2
15.5
2
100
0
62
48
0
51
0
1.00

Tables:   1

The End!