Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011718.1 Corchorus capsularis cultivar CVL-1 contig11739, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7865

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4932--5113
22
8.3
22
72
13
133
32
8
19
39
1.82
5149--5475
22
14.7
21
66
16
108
38
10
16
34
1.84
5350--5500
66
2.3
65
80
6
162
39
9
15
34
1.81
5581--6051
44
10.8
44
69
11
242
37
10
15
35
1.82
5595--6144
22
25.1
22
66
14
138
39
9
15
35
1.81
5892--5998
45
2.4
44
80
7
110
32
10
16
40
1.83
6062--6157
45
2.2
44
79
5
104
48
9
9
32
1.67
6245--6273
2
14.5
2
100
0
58
51
0
0
48
1.00
7067--7100
15
2.3
15
90
10
52
61
5
5
26
1.42
7517--7573
27
2.1
27
83
3
71
59
8
1
29
1.38

Tables:   1

The End!