Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011727.1 Corchorus capsularis cultivar CVL-1 contig11748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29998

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2140--2205
33
2.0
33
94
2
116
18
19
16
45
1.86
3160--3186
13
2.1
13
100
0
54
29
0
22
48
1.51
8067--8162
15
6.6
15
69
7
72
19
62
0
17
1.33
19559--19693
31
4.4
31
76
10
143
26
20
17
36
1.94
19590--19753
60
2.7
60
88
1
240
28
19
17
34
1.94
19562--19757
31
6.5
31
71
9
127
28
19
16
35
1.94
25628--25662
18
1.9
18
94
0
61
25
40
11
22
1.88
28028--28062
12
2.9
12
82
0
52
14
17
11
57
1.66

Tables:   1

The End!