Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011733.1 Corchorus capsularis cultivar CVL-1 contig11754, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11939

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5695--5754
29
2.1
29
100
0
120
26
16
20
36
1.93
6064--6215
62
2.5
62
86
0
205
34
12
9
42
1.76
6185--6747
22
25.7
22
69
12
209
35
15
10
38
1.82
6243--6288
24
2.0
24
91
4
76
26
10
6
56
1.58
6856--6999
44
3.3
44
73
11
134
32
14
11
41
1.81
6856--6999
22
6.5
22
73
12
91
32
14
11
41
1.81
7057--7148
38
2.5
37
77
7
105
54
8
21
15
1.68
7267--7334
31
2.2
32
78
10
77
45
5
14
33
1.69
8551--8620
28
2.6
27
84
8
99
18
18
10
52
1.72
8697--8729
2
16.5
2
100
0
66
51
48
0
0
1.00
10035--10087
24
2.2
24
82
0
61
26
16
9
47
1.77
10953--11017
26
2.5
26
85
9
87
43
9
20
27
1.82
11431--11938
197
2.5
200
86
3
718
34
12
16
35
1.87

Tables:   1

The End!