Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011744.1 Corchorus capsularis cultivar CVL-1 contig11765, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11112

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
228--292
30
2.1
30
83
8
78
40
29
15
15
1.88
723--800
29
2.6
30
76
15
90
16
14
29
39
1.88
837--2556
321
5.4
320
85
4
2182
33
14
17
34
1.91
836--2498
634
2.6
633
86
4
2255
33
14
17
34
1.91
2692--5581
321
8.9
323
83
5
3209
32
14
17
34
1.91
4895--4945
25
2.0
25
96
0
93
19
13
15
50
1.77
8846--8875
15
2.0
15
100
0
60
53
20
0
26
1.46

Tables:   1

The End!