Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011746.1 Corchorus capsularis cultivar CVL-1 contig11767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70572

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12959--12999
1
41.0
1
100
0
82
100
0
0
0
0.00
23645--23673
14
2.1
14
100
0
58
37
20
6
34
1.80
24530--24610
29
2.8
29
87
7
112
13
11
22
53
1.71
34315--34921
304
2.0
304
98
0
1160
38
13
19
28
1.89
35049--35081
11
3.0
11
91
8
50
42
0
3
54
1.15
37314--37385
33
2.2
33
87
5
101
18
43
25
13
1.86
47438--47483
22
2.0
24
87
8
69
69
0
21
8
1.15
50289--50333
16
2.8
16
93
0
72
60
13
6
20
1.55
51021--51051
1
31.0
1
100
0
62
0
0
0
100
0.00
55676--55715
9
4.4
9
87
0
62
32
45
0
22
1.53
58044--58105
25
2.4
25
91
5
97
20
11
12
54
1.68
58029--58131
31
3.5
31
78
14
94
24
13
12
49
1.77
62776--62867
44
2.1
44
100
0
184
32
27
15
25
1.95
69087--69150
33
1.9
33
96
0
119
35
21
21
20
1.96

Tables:   1

The End!