Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011747.1 Corchorus capsularis cultivar CVL-1 contig11768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41841

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545--595
10
5.1
10
78
0
57
3
15
0
80
0.86
551--590
22
1.9
21
90
10
64
5
15
0
80
0.88
4766--4799
16
2.1
17
88
5
52
67
17
5
8
1.37
19086--19456
189
2.0
189
100
0
742
36
13
25
24
1.92
19484--19752
132
2.0
132
99
0
529
37
7
32
22
1.82
22984--23022
18
2.2
18
86
4
53
33
7
28
30
1.85
23061--23090
3
10.0
3
92
0
51
33
30
3
33
1.74
32402--32480
29
2.7
29
78
4
68
29
11
24
35
1.90
34090--34287
91
2.2
90
90
0
315
32
27
12
27
1.92
34271--34303
16
2.1
16
100
0
66
36
18
12
33
1.88
34410--34436
13
2.1
13
100
0
54
37
29
7
25
1.83
35922--35966
23
2.0
23
86
0
63
35
15
17
31
1.92
41209--41348
31
4.5
31
86
1
183
17
25
27
30
1.97

Tables:   1

The End!