Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011752.1 Corchorus capsularis cultivar CVL-1 contig11773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22859

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
855--889
16
2.2
17
90
10
56
25
14
0
60
1.35
3356--3450
30
3.1
30
92
1
154
28
18
5
47
1.70
3553--3580
12
2.3
12
100
0
56
42
35
7
14
1.73
3745--3819
22
3.2
22
74
17
69
38
17
16
28
1.91
3749--3824
27
3.0
26
81
12
88
38
18
15
27
1.91
3832--3916
22
3.8
22
78
6
80
30
9
21
38
1.85
4047--4243
22
8.8
22
70
17
97
41
10
13
34
1.78
4084--4199
21
5.4
22
73
11
73
43
9
12
33
1.75
4183--4256
22
3.4
22
73
16
64
41
10
10
36
1.75
4274--4326
22
2.5
22
87
3
81
41
11
7
39
1.69
4361--4397
18
2.1
18
100
0
74
32
5
27
35
1.79
4450--4516
19
3.5
19
78
10
73
43
8
20
26
1.82
4910--4976
21
3.2
21
93
0
116
37
20
7
34
1.81

Tables:   1

The End!