Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011754.1 Corchorus capsularis cultivar CVL-1 contig11775, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6319

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
51
0
0
48
1.00
150--576
22
19.8
21
67
16
128
36
16
10
37
1.83
589--985
22
18.0
22
68
13
140
33
16
9
41
1.80
842--957
42
2.7
42
82
9
144
37
16
7
38
1.77
950--992
12
3.7
12
82
17
63
30
11
9
48
1.71
946--997
23
2.3
23
96
0
95
32
11
7
48
1.68
1016--1177
22
7.3
22
76
9
89
39
18
9
32
1.83
1070--1145
22
3.5
22
84
10
93
35
15
13
35
1.87
1057--1176
44
2.7
44
74
10
109
38
16
10
35
1.82
1517--1592
38
2.1
37
87
7
111
55
14
17
13
1.70
1713--1779
31
2.1
32
81
10
84
47
4
14
32
1.65
1720--1785
31
2.1
31
86
5
89
48
4
18
28
1.67
3807--5009
655
1.8
650
85
3
1678
35
16
14
32
1.90
3699--4974
321
3.9
320
79
8
1324
35
17
15
32
1.90

Tables:   1

The End!