Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011759.1 Corchorus capsularis cultivar CVL-1 contig11780, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37811

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3179--3209
2
15.5
2
100
0
62
51
0
0
48
1.00
4414--4509
50
1.9
50
91
4
158
25
10
20
43
1.83
7747--7781
2
17.5
2
100
0
70
51
0
0
48
1.00
8020--8599
319
1.8
319
80
5
715
37
15
12
34
1.85
10839--12201
330
4.1
327
78
8
1282
36
14
14
34
1.87
12882--12912
15
2.0
16
93
6
55
51
3
0
45
1.17
23246--26174
333
8.8
330
75
9
2343
33
14
15
36
1.87
23246--26168
680
4.4
664
80
8
2563
33
14
15
36
1.87
25212--27131
963
2.0
962
82
4
2350
33
14
15
36
1.88
26198--27132
329
2.8
328
79
7
996
33
14
15
36
1.88
26922--27413
259
1.9
256
82
7
622
34
12
15
38
1.85
27451--28282
330
2.5
328
80
5
843
33
13
14
38
1.85
37316--37401
2
42.5
2
80
6
93
43
8
0
48
1.32
37317--37398
19
4.2
20
84
4
89
41
8
0
50
1.33
37430--37494
30
2.1
31
91
2
105
29
16
4
49
1.66
37436--37501
30
2.1
31
88
5
98
33
13
4
48
1.63
37520--37581
15
4.3
15
70
17
51
40
6
0
53
1.27

Tables:   1

The End!