Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011761.1 Corchorus capsularis cultivar CVL-1 contig11782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76102

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5844--5897
7
7.7
7
85
8
74
25
12
14
46
1.81
6526--6574
20
2.5
19
80
6
53
20
6
20
53
1.67
6540--6594
20
2.8
20
77
5
58
25
7
18
49
1.73
20976--21004
15
1.9
15
100
0
58
6
20
27
44
1.77
21150--21361
69
3.1
69
93
2
347
39
10
13
36
1.79
27416--27449
17
2.0
17
94
0
59
20
29
26
23
1.99
37345--37403
28
2.1
27
84
9
75
52
11
8
27
1.66
38537--38760
111
2.0
111
88
3
335
38
16
8
36
1.79
67646--67683
19
2.0
19
90
10
60
26
26
26
21
1.99
69380--69407
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!