Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011762.1 Corchorus capsularis cultivar CVL-1 contig11783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78733

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17397--17588
95
2.0
94
90
3
305
39
13
22
24
1.90
18920--18957
20
1.9
20
88
0
58
28
7
39
23
1.83
20582--20627
20
2.2
20
84
3
56
47
15
6
30
1.70
20905--20969
29
2.2
29
86
2
85
50
15
12
21
1.76
26016--26068
27
2.0
27
88
0
79
41
13
9
35
1.76
40961--41016
29
1.9
29
85
7
78
53
5
17
23
1.64
43908--43958
2
25.0
2
84
4
66
45
3
1
49
1.32
49891--49917
3
9.0
3
100
0
54
66
0
0
33
0.92
49916--49947
3
10.7
3
100
0
64
34
0
0
65
0.93
65216--65242
14
1.9
14
100
0
54
44
18
0
37
1.50
67812--67863
2
27.0
2
77
14
56
46
0
5
48
1.26
67951--67992
20
2.0
21
90
4
68
26
19
21
33
1.97
68244--68279
2
18.0
2
100
0
72
50
0
0
50
1.00
78368--78402
14
2.5
14
90
0
61
37
0
62
0
0.95
78424--78543
62
2.0
61
94
1
213
36
15
4
44
1.65

Tables:   1

The End!