Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011764.1 Corchorus capsularis cultivar CVL-1 contig11785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31116

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5673--5703
3
10.0
3
93
6
53
35
0
0
64
0.94
7725--7769
22
2.0
22
95
0
81
31
4
35
28
1.77
8774--8802
6
4.8
6
100
0
58
13
51
0
34
1.42
18471--18521
3
17.0
3
91
0
84
62
33
3
0
1.13
23557--23589
17
1.9
17
93
0
57
36
15
3
45
1.61
24796--24867
35
2.1
35
97
0
135
50
8
12
29
1.69
25907--25943
15
2.4
16
91
8
60
29
2
10
56
1.47
26493--26573
23
3.5
23
89
3
128
43
29
13
13
1.83
28147--28193
23
2.0
23
91
0
76
38
27
10
23
1.88
31017--31116
48
2.1
48
98
0
191
49
17
14
20
1.80

Tables:   1

The End!