Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011766.1 Corchorus capsularis cultivar CVL-1 contig11787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45186

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--474
2
19.0
2
100
0
76
50
0
0
50
1.00
23435--23532
29
3.4
29
90
2
144
36
14
29
19
1.91
23967--24049
43
1.9
43
95
0
148
26
22
27
22
1.99
31150--31175
3
8.7
3
100
0
52
69
0
30
0
0.89
34312--34368
29
2.0
27
87
12
80
50
17
7
24
1.70
38635--38665
6
5.2
6
96
0
53
0
3
12
83
0.75
39955--40025
36
2.0
36
88
2
108
22
16
12
47
1.80
42328--42522
97
2.0
97
89
0
300
40
16
8
33
1.80
44790--44830
21
2.0
21
95
0
73
34
9
17
39
1.82

Tables:   1

The End!