Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001177.1 Corchorus capsularis cultivar CVL-1 contig01177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11694

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--608
10
6.3
11
71
15
59
0
43
0
56
0.99
540--602
6
10.5
6
79
6
65
0
42
0
57
0.99
540--602
30
2.1
30
88
5
92
0
42
0
57
0.99
9374--9413
20
2.0
20
100
0
80
25
5
30
40
1.77
10717--10749
2
16.5
2
93
0
57
48
0
3
48
1.17
11395--11429
15
2.3
15
95
5
61
80
0
20
0
0.72

Tables:   1

The End!