Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011775.1 Corchorus capsularis cultivar CVL-1 contig11796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7013

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--298
31
2.8
31
83
0
111
17
25
25
32
1.97
331--387
30
1.9
30
85
7
80
40
12
21
26
1.88
656--717
29
2.2
29
88
2
90
22
22
12
41
1.88
656--730
29
2.6
30
78
14
70
20
24
14
41
1.89
5935--5981
21
2.2
21
88
0
67
36
6
23
34
1.80

Tables:   1

The End!