Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011780.1 Corchorus capsularis cultivar CVL-1 contig11801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53109

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--33
2
13.0
2
100
0
52
0
50
0
50
1.00
21539--21602
21
3.1
21
71
8
69
35
20
7
35
1.82
30444--30475
3
10.7
3
100
0
64
68
0
31
0
0.90
33673--33707
16
2.2
16
100
0
70
31
28
20
20
1.97
34225--34272
24
2.0
24
91
0
78
29
20
22
27
1.99
41692--41721
1
30.0
1
100
0
60
0
0
0
100
0.00
47699--47737
21
1.9
20
85
15
53
28
25
10
35
1.89

Tables:   1

The End!