Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011782.1 Corchorus capsularis cultivar CVL-1 contig11803, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38258

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6484--6750
89
3.0
89
95
1
491
30
21
15
32
1.94
11914--12048
65
2.1
66
94
1
236
29
13
14
42
1.84
13329--13752
83
4.8
83
64
18
187
33
14
20
31
1.93
13313--13844
273
2.0
268
95
1
965
32
15
20
31
1.94
13779--15301
371
4.1
375
90
4
2323
27
18
17
36
1.93
31793--31822
2
15.0
2
100
0
60
50
0
0
50
1.00
34606--34640
9
3.9
9
84
0
52
0
34
11
54
1.37
36791--36827
12
2.9
13
88
11
51
10
5
2
81
0.96
36778--36830
15
3.3
17
78
21
69
11
5
3
79
1.03
36778--36834
29
1.9
30
92
7
98
10
7
3
78
1.05
38203--38235
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!