Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011784.1 Corchorus capsularis cultivar CVL-1 contig11805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51038

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--47
2
17.0
2
93
6
59
51
0
0
48
1.00
33146--33189
21
2.1
21
86
0
61
18
29
9
43
1.80
33277--33316
21
1.9
21
89
0
62
52
0
0
47
1.00
33415--33498
42
2.0
42
90
0
132
29
17
10
41
1.84
34954--35037
41
2.0
42
95
2
152
41
3
7
47
1.48
34957--35045
42
2.1
41
91
2
142
41
3
7
47
1.49
35350--35387
11
3.5
11
89
10
51
39
0
2
57
1.12
38399--38535
56
2.4
57
81
3
161
35
19
14
30
1.92
38492--38592
26
3.7
26
86
6
130
31
21
15
30
1.95
38431--38592
83
2.0
82
86
3
227
32
20
15
31
1.94
38450--38594
31
5.0
31
79
10
139
32
20
15
31
1.94

Tables:   1

The End!