Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011795.1 Corchorus capsularis cultivar CVL-1 contig11816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59003

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11160--11231
29
2.4
29
81
2
81
40
26
11
22
1.87
11841--11890
25
2.0
25
100
0
100
40
12
16
32
1.84
17028--17129
51
2.0
51
94
0
177
32
2
21
43
1.68
25123--25165
3
14.3
3
100
0
86
32
0
0
67
0.91
36288--36323
2
18.0
2
100
0
72
50
0
0
50
1.00
36813--37002
95
2.0
95
100
0
380
38
8
15
36
1.78
40900--40972
31
2.6
28
87
10
96
31
5
12
50
1.62
56798--56835
3
12.7
3
94
0
67
34
0
0
65
0.93

Tables:   1

The End!