Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011799.1 Corchorus capsularis cultivar CVL-1 contig11820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61613

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37596--37783
65
2.9
64
95
2
333
28
8
11
51
1.68
49846--49915
12
6.0
12
77
15
76
5
25
10
58
1.52
49879--49913
13
2.8
13
95
4
63
5
25
5
62
1.40
50730--50764
18
1.9
18
94
0
61
28
8
14
48
1.73
51116--51178
31
2.0
31
100
0
126
41
9
31
17
1.82
51715--51746
13
2.5
13
100
0
64
31
12
0
56
1.37
53172--53207
19
1.9
18
88
5
54
38
0
0
61
0.96
53216--53303
33
2.7
33
85
0
131
11
31
39
17
1.85
55832--55873
20
2.1
20
90
0
66
28
50
0
21
1.49

Tables:   1

The End!