Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011800.1 Corchorus capsularis cultivar CVL-1 contig11821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53684

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--431
154
2.8
154
90
0
653
39
17
18
24
1.92
669--701
4
8.2
4
100
0
66
75
0
0
24
0.80
1853--1881
2
14.5
2
100
0
58
51
0
0
48
1.00
2320--2349
2
15.5
2
93
6
53
50
0
0
50
1.00
2409--2448
19
2.1
19
95
0
71
25
22
5
47
1.71
32663--32690
2
14.0
2
100
0
56
50
0
0
50
1.00
33469--33502
17
1.9
18
88
5
52
29
0
26
44
1.55
51576--51793
33
6.5
33
93
4
364
35
27
6
30
1.82
51576--51793
103
2.2
99
94
3
382
35
27
6
30
1.82
52302--52387
45
1.9
45
85
0
118
30
19
26
23
1.98

Tables:   1

The End!