Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011804.1 Corchorus capsularis cultivar CVL-1 contig11825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26093

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2021--2045
1
25.0
1
100
0
50
100
0
0
0
0.00
4046--4092
20
2.4
19
83
13
60
44
6
8
40
1.60
13753--13781
12
2.3
13
94
5
51
68
0
17
13
1.20
17846--17930
42
2.1
42
95
4
156
32
14
14
38
1.86
18360--18405
23
2.0
23
95
0
83
21
32
6
39
1.79
18432--18463
16
2.0
16
100
0
64
25
25
6
43
1.77

Tables:   1

The End!