Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011809.1 Corchorus capsularis cultivar CVL-1 contig11830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35123

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
731--3295
332
7.8
332
86
4
3253
34
16
16
32
1.92
6247--6292
22
2.1
22
83
0
56
45
15
8
30
1.76
11664--11731
34
2.0
34
100
0
136
38
17
5
38
1.74
20897--20927
2
15.5
2
100
0
62
48
0
0
51
1.00
25157--25236
37
2.1
39
84
9
103
47
5
0
47
1.24
25417--25451
18
1.9
18
88
0
52
42
40
11
5
1.65
26716--26781
34
1.9
34
96
0
123
34
19
10
34
1.86
27212--27284
23
3.1
23
88
7
94
32
36
5
24
1.79
27261--27296
17
2.1
17
94
0
63
33
30
8
27
1.86
27720--27764
23
2.0
23
82
8
56
22
11
11
55
1.66

Tables:   1

The End!