Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011815.1 Corchorus capsularis cultivar CVL-1 contig11836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46620

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1008--1062
5
11.4
5
88
7
87
58
0
18
23
1.39
1186--1223
8
4.5
8
87
12
58
86
13
0
0
0.56
1186--1223
18
2.2
18
90
9
62
86
13
0
0
0.56
7444--7470
2
13.5
2
100
0
54
48
0
51
0
1.00
13113--13137
3
8.3
3
100
0
50
0
32
0
68
0.90
15464--15524
28
2.2
28
100
0
122
40
13
3
42
1.60
19323--19360
18
2.1
19
85
5
51
39
21
26
13
1.89
20031--20069
15
2.6
15
91
0
60
48
0
33
17
1.48
31528--31561
2
17.0
2
93
0
59
47
0
2
50
1.16
40087--40149
33
2.0
31
93
6
108
49
4
26
19
1.68

Tables:   1

The End!