Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011816.1 Corchorus capsularis cultivar CVL-1 contig11837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36401

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11854--11886
1
33.0
1
100
0
66
0
0
0
100
0.00
18016--18054
18
2.2
18
100
0
78
35
5
20
38
1.75
28773--28799
2
13.5
2
100
0
54
51
0
0
48
1.00
32080--32112
4
8.0
4
93
6
57
0
24
0
75
0.80
32081--32127
8
6.0
8
90
7
53
0
14
0
85
0.61
32081--32127
12
3.9
12
81
8
51
0
14
0
85
0.61
33766--34097
141
2.4
141
90
3
526
36
9
10
43
1.72
34382--34774
139
2.8
138
83
5
450
35
11
8
44
1.71

Tables:   1

The End!