Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011820.1 Corchorus capsularis cultivar CVL-1 contig11841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24026

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1535--1569
2
18.0
2
94
5
63
48
0
0
51
1.00
2682--2711
12
2.5
12
88
0
51
26
50
16
6
1.70
2846--2872
2
13.5
2
100
0
54
48
0
0
51
1.00
18677--18715
18
2.2
18
85
0
51
0
10
7
82
0.86
18831--20389
318
4.8
322
86
6
2025
33
15
15
35
1.89
20184--20797
203
3.0
202
89
3
894
38
12
13
36
1.81
21511--22130
209
3.0
208
87
5
864
39
11
12
36
1.80
21924--24014
333
6.3
333
87
3
2939
34
15
15
35
1.89

Tables:   1

The End!