Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011822.1 Corchorus capsularis cultivar CVL-1 contig11843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9639

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
351--602
86
3.0
84
91
4
395
30
30
29
9
1.88
577--627
25
2.0
25
96
0
93
33
35
27
3
1.75
495--714
106
2.0
108
89
6
338
32
30
29
7
1.85
409--795
192
2.0
192
97
1
731
31
31
29
8
1.86
601--1047
86
5.3
86
86
4
629
32
31
27
8
1.86
351--881
278
1.9
275
89
5
827
31
31
28
8
1.86
601--1047
167
2.6
169
87
3
650
32
31
27
8
1.86
1132--1158
2
13.5
2
100
0
54
51
0
48
0
1.00
4975--4999
2
12.5
2
100
0
50
48
0
0
52
1.00
5787--5816
2
15.0
2
100
0
60
50
0
0
50
1.00
6707--6783
29
2.7
27
78
13
91
38
29
14
16
1.88

Tables:   1

The End!