Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011829.1 Corchorus capsularis cultivar CVL-1 contig11850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67200

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--51
2
23.0
2
100
0
92
0
50
0
50
1.00
15859--15918
26
2.3
27
88
5
95
31
5
0
63
1.16
23281--23309
3
9.7
3
100
0
58
0
31
0
68
0.89
27836--27875
18
2.2
18
86
4
53
32
12
17
37
1.87
38489--38559
37
1.9
37
88
0
106
40
15
21
22
1.90
43736--43773
19
2.0
19
85
10
51
0
15
2
81
0.80
55213--55265
15
3.5
15
75
10
54
7
50
3
37
1.49
63464--63499
17
2.1
17
100
0
72
16
5
11
66
1.40
62708--67200
327
13.7
321
78
8
4286
36
16
14
33
1.88
62793--67200
651
6.7
646
80
8
4533
35
16
14
33
1.88

Tables:   1

The End!